| 00800.mpls | Syzygy | Episode | 3 | 13 | 2436 | 0:44:18 | 10.7 GB |
| 00802.mpls | Grotesque | Episode | 3 | 14 | 2437 | 0:44:43 | 10.8 GB |
| 00804.mpls | Piper Maru | Episode | 3 | 15 | 2362 | 0:44:51 | 10.8 GB |
| 00806.mpls | Apocrypha | Episode | 3 | 16 | 2363 | 0:44:13 | 10.8 GB |
| 02394.m2ts | Chris Carter Talks About Season 3: Piper Maru | Extra | 3 | 15 | 2394 | 0:01:27 | 86.6 MB |
| 02395.m2ts | Chris Carter Talks About Season 3: Apocrypha | Extra | 3 | 16 | 2395 | 0:01:28 | 87.5 MB |
| 02438.m2ts | Piper Maru International Clips - German | Extra | 3 | 15 | 2438 | 0:01:05 | 63.6 MB |
| 02439.m2ts | Piper Maru International Clips - Japanese | Extra | 3 | 15 | 2439 | 0:00:59 | 57.7 MB |
| 02440.m2ts | Piper Maru International Clips - Spanish | Extra | 3 | 15 | 2440 | 0:01:02 | 60.6 MB |
| 02444.m2ts | Apocrypha Special Effects | Extra | 3 | 16 | 2444 | 0:01:48 | 107.3 MB |
| 02463.m2ts | Piper Maru International Clips - Italian | Extra | 3 | 15 | 2463 | 0:01:02 | 60.7 MB |