| 00800.mpls | The Blessing Way | Episode | 3 | 1 | 2436 | 0:44:44 | 10.7 GB |
| 00802.mpls | Paper Clip | Episode | 3 | 2 | 2437 | 0:44:52 | 10.8 GB |
| 00804.mpls | D.P.O. | Episode | 3 | 3 | 2362 | 0:44:10 | 10.6 GB |
| 00806.mpls | Clyde Bruckman's Final Repose | Episode | 3 | 4 | 2363 | 0:45:18 | 10.9 GB |
| 02395.m2ts | Mulder Wishes for a Genuine Psychic | DeletedScene | 3 | 4 | 2395 | 0:01:51 | 113.2 MB |
| 02438.m2ts | Paper Clip International Clips: German | Extra | 3 | 2 | 2438 | 0:01:06 | 64.5 MB |
| 02439.m2ts | Paper Clip International Clips: Japanese | Extra | 3 | 2 | 2439 | 0:00:55 | 53.8 MB |
| 02440.m2ts | Paper Clip International Clips: Spanish | Extra | 3 | 2 | 2440 | 0:01:08 | 66.5 MB |
| 02441.m2ts | Chris Carter Talks About Season 3: Clyde Bruckman's Final Repose | Extra | 3 | 4 | 2441 | 0:01:54 | 112.8 MB |
| 02442.m2ts | Chris Carter Talks About Season 3: Paper Clip | Extra | 3 | 2 | 2442 | 0:01:57 | 115.9 MB |
| 02443.m2ts | Chris Carter Talks About Season 3: The Blessing Way | Extra | 3 | 1 | 2443 | 0:02:06 | 124.7 MB |
| 02444.m2ts | Scully Looks For Comfort | DeletedScene | 3 | 1 | 2444 | 0:04:04 | 237.2 MB |
| 02463.m2ts | Paper Clip International Clips: Italian | Extra | 3 | 2 | 2463 | 0:01:01 | 60.5 MB |